7OAF | pdb_00007oaf

conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form III

PDB DOI: https://doi.org/10.2210/pdb7OAF/pdb

Classification: PROTEIN FIBRIL
Organism(s): Saccharomyces cerevisiae S288C, Candidatus Magnetomorum sp. HK-1
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2021-04-19 Released: 2022-05-04
Deposition Author(s): Adlakha, J., Albrecht, R., Hartmann, M.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.45 Å
R-Value Free:
0.215 (Depositor), 0.217 (DCC)
R-Value Work:
0.198 (Depositor), 0.200 (DCC)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A, crystal form III

Adlakha, J.

To be published.

Macromolecule Content

Total Structure Weight: 30.44 kDa
Atom Count: 2,313
Modeled Residue Count: 243
Deposited Residue Count: 258
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
General control transcription factor GCN4,conserved hypothetical protein residues 311-335 from Candidatus Magnetomorum sp. HK-1 fused to GCN4 adaptors, mutant beta1/A,General control transcription factor GCN4	A, B, C	86	Saccharomyces cerevisiae S288C, Candidatus Magnetomorum sp. HK-1	Mutation(s): 18 Gene Names: GCN4, AAS101, AAS3, ARG9, YEL009C, MHK_004959
UniProt
Find proteins for A0ACD6B9X4 (Candidatus Magnetomorum sp. HK-1) Explore A0ACD6B9X4 Go to UniProtKB: A0ACD6B9X4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0ACD6B9X4
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
1PE Query on 1PE Download:Ideal Coordinates CCD File SDF format, chain D [auth A] MOL2 format, chain D [auth A] mmCIF format, chain D [auth A]	D [auth A]	PENTAETHYLENE GLYCOL C₁₀ H₂₂ O₆ JLFNLZLINWHATN-UHFFFAOYSA-N		Interactions Focus chain D [auth A] Interactions & Density Focus chain D [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.45 Å
R-Value Free: 0.215 (Depositor), 0.217 (DCC)
R-Value Work: 0.198 (Depositor), 0.200 (DCC)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 26.01	α = 90
b = 38.849	β = 96.178
c = 128.811	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XDS	data scaling
MOLREP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2022-05-04

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2022-05-04
Type: Initial release
Version 1.1: 2024-01-31
Changes: Data collection, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.