Crystallographic structure of L,D-transpeptidase 2 from Mycobacterium tuberculosis.
Libreros, G.A., Dias, M.V.B.To be published.
Experimental Data Snapshot
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
L,D-transpeptidase 2 | 408 | Mycobacterium tuberculosis H37Rv | Mutation(s): 0  Gene Names: ldtB, lppS, Rv2518c, RVBD_2518c, P425_02624 EC: 2.3.2 | ||
UniProt | |||||
Find proteins for I6Y9J2 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore I6Y9J2  Go to UniProtKB:  I6Y9J2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | I6Y9J2 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
0JC Query on 0JC | C [auth A] D [auth A] E [auth A] F [auth A] J [auth B] | Di-mu-iodobis(ethylenediamine)diplatinum(II) C4 H16 I2 N4 Pt2 XXLKNYJQAYMQHB-UHFFFAOYSA-N | |||
PT Query on PT | I [auth B] | PLATINUM (II) ION Pt HRGDZIGMBDGFTC-UHFFFAOYSA-N | |||
6CL Query on 6CL | H [auth B] | 6-CARBOXYLYSINE C7 H15 N2 O4 GMKMEZVLHJARHF-SYDPRGILSA-O | |||
DGL Query on DGL | G [auth A] | D-GLUTAMIC ACID C5 H9 N O4 WHUUTDBJXJRKMK-GSVOUGTGSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 117.528 | α = 90 |
b = 121.051 | β = 90 |
c = 122.699 | γ = 90 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Fundacao para a Ciencia e a Tecnologia | Portugal | 2010/15971-3 |