Stabilization of Ribosomal RNA of the Small Subunit by Spermidine in Staphylococcus aureus
Belinite, M., Khusainov, I., Soufari, H., Marzi, S., Romby, P., Yusupov, M., Hashem, Y.(2021) Front Mol Biosci 8: 1022
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2021) Front Mol Biosci 8: 1022
Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S2 | C [auth b] | 255 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FZ25 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FZ25  Go to UniProtKB:  Q2FZ25 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FZ25 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S4 | D [auth d] | 200 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FXK6 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FXK6  Go to UniProtKB:  Q2FXK6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FXK6 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S5 | E [auth e] | 166 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FW23 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FW23  Go to UniProtKB:  Q2FW23 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FW23 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 6 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S6 | F [auth f] | 98 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2G113 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2G113  Go to UniProtKB:  Q2G113 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2G113 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 7 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S8 | G [auth h] | 132 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FW20 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FW20  Go to UniProtKB:  Q2FW20 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FW20 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 8 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S11 | H [auth k] | 129 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FW31 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FW31  Go to UniProtKB:  Q2FW31 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FW31 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 9 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S12 | I [auth l] | 137 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0A0H0 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore P0A0H0  Go to UniProtKB:  P0A0H0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A0H0 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 10 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S15 | J [auth o] | 89 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2G2Q1 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2G2Q1  Go to UniProtKB:  Q2G2Q1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2G2Q1 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 11 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S16 | K [auth p] | 91 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FZ45 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FZ45  Go to UniProtKB:  Q2FZ45 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FZ45 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 12 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S17 | L [auth q] | 87 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FW15 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FW15  Go to UniProtKB:  Q2FW15 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FW15 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 13 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S18 | M [auth r] | 80 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2G111 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2G111  Go to UniProtKB:  Q2G111 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2G111 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 14 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
30S ribosomal protein S20 | N [auth t] | 83 | Staphylococcus aureus subsp. aureus NCTC 8325 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q2FXY6 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FXY6  Go to UniProtKB:  Q2FXY6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q2FXY6 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
mRNA | 32 | Staphylococcus aureus subsp. aureus NCTC 8325 | |||
Sequence AnnotationsExpand | |||||
|
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
16S ribosomal RNA | B [auth a] | 1,556 | Staphylococcus aureus subsp. aureus NCTC 8325 | ||
Sequence AnnotationsExpand | |||||
|
Funding Organization | Location | Grant Number |
---|---|---|
Laboratories of Excellence (LabEx) | France | ANR-10-LABX-0036 NETRNA |
Agence Nationale de la Recherche (ANR) | France | ANR-16-CE11-0007-01 |