7ZQE

Plastocyanin bound to PSI of Chlamydomonas reinhardtii

  • Classification: PHOTOSYNTHESIS
  • Organism(s): Chlamydomonas reinhardtii
  • Mutation(s): No 

  • Deposited: 2022-04-29 Released: 2022-11-23 
  • Deposition Author(s): Naschberger, A., Amunts, A.
  • Funding Organization(s): The Swedish Foundation for Strategic Research, Knut and Alice Wallenberg Foundation, German Federal Ministry for Education and Research, German-Israeli Foundation for Research and Development

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.55 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.

Naschberger, A.Mosebach, L.Tobiasson, V.Kuhlgert, S.Scholz, M.Perez-Boerema, A.Ho, T.T.H.Vidal-Meireles, A.Takahashi, Y.Hippler, M.Amunts, A.

(2022) Nat Plants 8: 1191-1201

  • DOI: https://doi.org/10.1038/s41477-022-01253-4
  • Primary Citation of Related Structures:  
    7ZQ9, 7ZQC, 7ZQD, 7ZQE

  • PubMed Abstract: 

    Photosystem I (PSI) enables photo-electron transfer and regulates photosynthesis in the bioenergetic membranes of cyanobacteria and chloroplasts. Being a multi-subunit complex, its macromolecular organization affects the dynamics of photosynthetic membranes. Here we reveal a chloroplast PSI from the green alga Chlamydomonas reinhardtii that is organized as a homodimer, comprising 40 protein subunits with 118 transmembrane helices that provide scaffold for 568 pigments. Cryogenic electron microscopy identified that the absence of PsaH and Lhca2 gives rise to a head-to-head relative orientation of the PSI-light-harvesting complex I monomers in a way that is essentially different from the oligomer formation in cyanobacteria. The light-harvesting protein Lhca9 is the key element for mediating this dimerization. The interface between the monomers is lacking PsaH and thus partially overlaps with the surface area that would bind one of the light-harvesting complex II complexes in state transitions. We also define the most accurate available PSI-light-harvesting complex I model at 2.3 Å resolution, including a flexibly bound electron donor plastocyanin, and assign correct identities and orientations to all the pigments, as well as 621 water molecules that affect energy transfer pathways.


  • Organizational Affiliation

    Science for Life Laboratory, Department of Biochemistry and Biophysics, Stockholm University, Solna, Sweden.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Plastocyanin, chloroplasticA [auth M]145Chlamydomonas reinhardtiiMutation(s): 0 
UniProt
Find proteins for P18068 (Chlamydomonas reinhardtii)
Explore P18068 
Go to UniProtKB:  P18068
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP18068
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
CU (Subject of Investigation/LOI)
Query on CU

Download Ideal Coordinates CCD File 
B [auth M]COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.55 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
The Swedish Foundation for Strategic ResearchSwedenARC19-0051
Knut and Alice Wallenberg FoundationSweden2018.0080
German Federal Ministry for Education and ResearchGermanyNRW 28 313-WO44A
German-Israeli Foundation for Research and DevelopmentGermanyG-1483- 207/2018

Revision History  (Full details and data files)

  • Version 1.0: 2022-11-23
    Type: Initial release