7YYO

Cryo-EM structure of an a-carboxysome RuBisCO enzyme at 2.9 A resolution


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.87 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Cryo-EM analysis of the shell architecture and internal organization of an intact a-carboxysome

Evans, S.L.Al-Hazeem, M.M.J.Mann, D.Smetacek, N.Beavil, A.Sun, Y.Chen, T.Dykes, G.F.Liu, L.Bergeron, J.R.C.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Ribulose bisphosphate carboxylase large chain
A, C, E, G, I, K, M, O
A, C, E, G, I, K, M, O
470CyanobiumMutation(s): 0 
Gene Names: rbcLcbbLCPCC7001_1083
EC: 4.1.1.39
UniProt
Find proteins for A5CKD0 (Cyanobium sp. PCC 7001)
Explore A5CKD0 
Go to UniProtKB:  A5CKD0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA5CKD0
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Ribulose bisphosphate carboxylase small chain
B, D, F, H, J, L, N, P
B, D, F, H, J, L, N, P
113CyanobiumMutation(s): 0 
Gene Names: cbbSCBM981_0867
EC: 4.1.1.39
UniProt
Find proteins for A0A182AM64 (Cyanobium sp. NIES-981)
Explore A0A182AM64 
Go to UniProtKB:  A0A182AM64
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A182AM64
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CAP (Subject of Investigation/LOI)
Query on CAP

Download Ideal Coordinates CCD File 
BA [auth K],
DA [auth M],
FA [auth O],
R [auth A],
T [auth C],
BA [auth K],
DA [auth M],
FA [auth O],
R [auth A],
T [auth C],
V [auth E],
X [auth G],
Z [auth I]
2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
C6 H14 O13 P2
ITHCSGCUQDMYAI-ZMIZWQJLSA-N
 Ligand Interaction
MG (Subject of Investigation/LOI)
Query on MG

Download Ideal Coordinates CCD File 
AA [auth K],
CA [auth M],
EA [auth O],
Q [auth A],
S [auth C],
AA [auth K],
CA [auth M],
EA [auth O],
Q [auth A],
S [auth C],
U [auth E],
W [auth G],
Y [auth I]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.87 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research Council (BBSRC)United Kingdom--

Revision History  (Full details and data files)

  • Version 1.0: 2023-01-25
    Type: Initial release