Effector binding domain of LysR-Type transcription factor LrhA from E. coli
Xie, C., Jiang, X.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Probable HTH-type transcriptional regulator LrhA | 319 | Escherichia coli | Mutation(s): 0  Gene Names: lrhA, genR, b2289, JW2284 | ![]() | |
UniProt | |||||
Find proteins for P36771 (Escherichia coli (strain K12)) Explore P36771  Go to UniProtKB:  P36771 | |||||
Entity Groups   | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P36771 | ||||
Sequence AnnotationsExpand | |||||
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| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PEG Query on PEG | J [auth G] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
| SO4 Query on SO4 | I [auth D], K [auth G] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 84.682 | α = 90 |
| b = 169.312 | β = 90 |
| c = 190.852 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHENIX | phasing |
| Coot | model building |
| PHASER | phasing |
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Education, Culture, Sports, Science and Technology (Japan) | Japan | -- |