7Y5S | pdb_00007y5s

CryoEM structure of Klebsiella phage Kp7 type I tail fiber gp51 in vitro

PDB DOI: https://doi.org/10.2210/pdb7Y5S/pdb
EM Map EMD-33623: EMDB EMDataResource

Classification: VIRAL PROTEIN
Organism(s): Klebsiella phage Kp7
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2022-06-17 Released: 2023-06-21
Deposition Author(s): Huang, L., Xiang, Y.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.00 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

Structure and assembly of the Klebsiella pneumoniae phage tail fibers

Huang, L., Xiang, Y.

To be published.

Macromolecule Content

Total Structure Weight: 219.06 kDa
Atom Count: 11,535
Modeled Residue Count: 1,515
Deposited Residue Count: 2,004
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
phage tail fiber	A, B, C	668	Klebsiella phage Kp7	Mutation(s): 0
UniProt
Find proteins for A0AA82WP05 (Klebsiella phage Kp7) Explore A0AA82WP05 Go to UniProtKB: A0AA82WP05
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0AA82WP05
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.00 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
RECONSTRUCTION	RELION	3.1.2

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2023-06-21

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History (Full details and data files)

Version 1.0: 2023-06-21
Type: Initial release
Version 1.1: 2024-07-03
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.