7Y22 | pdb_00007y22

CryoEM structure of Klebsiella phage Kp7 tail complex applied with C6 symmetry

  • Classification: VIRUS
  • Organism(s): Klebsiella phage Kp7
  • Mutation(s): No 

  • Deposited: 2022-06-09 Released: 2023-06-14 
  • Deposition Author(s): Huang, L., Xiang, Y.
  • Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

Validation slider image for 7Y22

This is version 1.1 of the entry. See complete history. 

Literature

Structure and assembly of the Klebsiella pneumoniae phage tail fibers

Huang, L., Xiang, Y.

To be published.

Macromolecule Content 

  • Total Structure Weight: 367.23 kDa 
  • Atom Count: 19,881 
  • Modeled Residue Count: 2,523 
  • Deposited Residue Count: 3,304 
  • Unique protein chains: 4

Macromolecules

Find similar proteins by:
|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
phage connector protein
A, B
522Klebsiella phage Kp7Mutation(s): 0 
UniProt
Find proteins for A0AA82WNZ8 (Klebsiella phage Kp7)
Explore A0AA82WNZ8 
Go to UniProtKB:  A0AA82WNZ8
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0AA82WNZ8
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:
|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
phage tail tubular protein AC [auth M],
D [auth X]		241Klebsiella phage Kp7Mutation(s): 0 
UniProt
Find proteins for A0AA82WNZ9 (Klebsiella phage Kp7)
Explore A0AA82WNZ9 
Go to UniProtKB:  A0AA82WNZ9
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0AA82WNZ9
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:
|  3D Structure
Entity ID: 3
MoleculeChains  Sequence LengthOrganismDetailsImage
phage tail tubular protein BE [auth Y]794Klebsiella phage Kp7Mutation(s): 0 
UniProt
Find proteins for A0AA82WP00 (Klebsiella phage Kp7)
Explore A0AA82WP00 
Go to UniProtKB:  A0AA82WP00
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0AA82WP00
Sequence Annotations
Expand
Reference Sequence
Find similar proteins by:
|  3D Structure
Entity ID: 4
MoleculeChains  Sequence LengthOrganismDetailsImage
tail adaptor proteinF [auth e],
G [auth f],
H [auth g]		328Klebsiella phage Kp7Mutation(s): 0 
UniProt
Find proteins for A0AA82WP01 (Klebsiella phage Kp7)
Explore A0AA82WP01 
Go to UniProtKB:  A0AA82WP01
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0AA82WP01
Sequence Annotations
Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.0.8

Structure Validation

View Full Validation Report



View more in-depth experimental data

Entry History 

& Funding Information

Deposition Data

Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China--

Revision History  (Full details and data files)

  • Version 1.0: 2023-06-14
    Type: Initial release
  • Version 1.1: 2024-07-03
    Changes: Data collection