7XDS

Crystal structure of wheat stem rust effector AvrSr35


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Free: 0.287 
  • R-Value Work: 0.257 
  • R-Value Observed: 0.258 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Pathogen effector AvrSr35 triggers Sr35 resistosome assembly via a direct recognition mechanism.

Zhao, Y.B.Liu, M.X.Chen, T.T.Ma, X.Li, Z.K.Zheng, Z.Zheng, S.R.Chen, L.Li, Y.Z.Tang, L.R.Chen, Q.Wang, P.Ouyang, S.

(2022) Sci Adv 8: eabq5108-eabq5108

  • DOI: https://doi.org/10.1126/sciadv.abq5108
  • Primary Citation of Related Structures:  
    7XDS, 7XE0, 7XVG, 7XX2

  • PubMed Abstract: 

    Nucleotide-binding, leucine-rich repeat receptors (NLRs) perceive pathogen effectors to trigger plant immunity. The direct recognition mechanism of pathogen effectors by coiled-coil NLRs (CNLs) remains unclear. We demonstrate that the Triticum monococcum CNL Sr35 directly recognizes the pathogen effector AvrSr35 from Puccinia graminis f. sp . tritici and report a cryo-electron microscopy structure of Sr35 resistosome and a crystal structure of AvrSr35. We show that AvrSr35 forms homodimers that are disassociated into monomers upon direct recognition by the leucine-rich repeat domain of Sr35, which induces Sr35 resistosome assembly and the subsequent immune response. The first 20 amino-terminal residues of Sr35 are indispensable for immune signaling but not for plasma membrane association. Our findings reveal the direct recognition and activation mechanism of a plant CNL and provide insights into biochemical function of Sr35 resistosome.


  • Organizational Affiliation

    Provincial University Key Laboratory of Cellular Stress Response and Metabolic Regulation, the Key Laboratory of Innate Immune Biology of Fujian Province, Biomedical Research Center of South China, Key Laboratory of OptoElectronic Science and Technology for Medicine of the Ministry of Education, College of Life Sciences, Fujian Normal University, Fuzhou 350117, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
AvrSr35
A, B
575Puccinia graminis f. sp. triticiMutation(s): 0 
Gene Names: PGT21_019944PGTUg99_030428
UniProt
Find proteins for A0A5B0N367 (Puccinia graminis f. sp. tritici)
Explore A0A5B0N367 
Go to UniProtKB:  A0A5B0N367
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A5B0N367
Sequence Annotations
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChains TypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Free: 0.287 
  • R-Value Work: 0.257 
  • R-Value Observed: 0.258 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.122α = 90
b = 115.273β = 90
c = 143.162γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
xia2data reduction
xia2data scaling
PHENIXphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China82172287

Revision History  (Full details and data files)

  • Version 1.0: 2022-09-28
    Type: Initial release