7X5T | pdb_00007x5t

Structure of the C-terminal head domain of the fowl adenovirus type 4 fiber 1

• PDB DOI: https://doi.org/10.2210/pdb7X5T/pdb

• Classification: VIRAL PROTEIN
• Organism(s): Fowl adenovirus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2022-03-05 Released: 2022-03-16 
• Deposition Author(s): Song, Y.P., Wei, Q.
• Funding Organization(s): National Natural Science Foundation of China (NSFC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free: 
  0.190 (Depositor), 0.200 (DCC) 
• R-Value Work: 
  0.135 (Depositor), 0.150 (DCC) 
• R-Value Observed: 
  0.138 (Depositor) 

Starting Model: experimental

Literature

Structure of the C-terminal head domain of the fowl adenovirus type 4 fiber 1

Song, Y.P., Wei, Q.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 27.26 kDa 
• Atom Count: 1,908 
• Modeled Residue Count: 216 
• Deposited Residue Count: 257 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fiber-1	A	257	Fowl adenovirus	Mutation(s): 0

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.65 Å
• R-Value Free:  0.190 (Depositor), 0.200 (DCC) 
• R-Value Work:  0.135 (Depositor), 0.150 (DCC) 
• R-Value Observed: 0.138 (Depositor) 

Space Group: P 4 3 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 116.6	α = 90
b = 116.6	β = 90
c = 116.6	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
autoPROC	data reduction
REFMAC	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2022-03-16 
Deposition Author(s): Song, Y.P., Wei, Q.

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Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History  

• Version 1.0: 2022-03-16
  Type: Initial release
  
• Version 1.1: 2023-11-29
  Changes: Data collection, Refinement description