7WMZ

Crystal structure of methylenetetrahydrofolate reductase MSMEG_6649 from Mycobacterium smegmatis with NADH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.92 Å
  • R-Value Free: 0.403 
  • R-Value Work: 0.355 
  • R-Value Observed: 0.357 

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Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of methylenetetrahydrofolate reductase MSMEG_6649 from Mycobacterium smegmatis with NADH

Lin, W.Wang, W.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Methylenetetrahydrofolate reductase296Mycolicibacterium smegmatis MC2 155Mutation(s): 0 
Gene Names: MSMEG_6649
UniProt
Find proteins for A0R6S0 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155))
Explore A0R6S0 
Go to UniProtKB:  A0R6S0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0R6S0
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAI (Subject of Investigation/LOI)
Query on NAI

Download Ideal Coordinates CCD File 
G [auth E],
H [auth A],
I [auth B],
J [auth C],
K [auth D],
G [auth E],
H [auth A],
I [auth B],
J [auth C],
K [auth D],
L [auth F]
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
C21 H29 N7 O14 P2
BOPGDPNILDQYTO-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.92 Å
  • R-Value Free: 0.403 
  • R-Value Work: 0.355 
  • R-Value Observed: 0.357 
  • Space Group: I 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 70.928α = 90
b = 104.294β = 94.08
c = 318.532γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
HKL-3000data reduction
PHENIXphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China81903526

Revision History  (Full details and data files)

  • Version 1.0: 2023-01-25
    Type: Initial release