7W83 | pdb_00007w83

Structure of the C-terminal head domain of the fowl adenovirus type 4 fiber 2

PDB DOI: https://doi.org/10.2210/pdb7W83/pdb

Classification: VIRAL PROTEIN
Organism(s): Fowl aviadenovirus 4
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2021-12-07 Released: 2021-12-29
Deposition Author(s): Jin, Q.Y., Zhang, G.P.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.29 Å
R-Value Free:
0.221 (Depositor), 0.228 (DCC)
R-Value Work:
0.185 (Depositor), 0.194 (DCC)
R-Value Observed:
0.187 (Depositor)

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

Validation slider image for 7W83

This is version 1.1 of the entry. See complete history.

Literature

Structure of the C-terminal head domain of the fowl adenovirus type 4 fiber 2

Jin, Q.Y.

To be published.

Macromolecule Content

Total Structure Weight: 47.53 kDa
Atom Count: 3,786
Modeled Residue Count: 399
Deposited Residue Count: 444
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fiber-2 protein	A, B	222	Fowl aviadenovirus 4	Mutation(s): 0
UniProt
Find proteins for A0A1B1SKZ0 (Fowl aviadenovirus 4) Explore A0A1B1SKZ0 Go to UniProtKB: A0A1B1SKZ0
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A1B1SKZ0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.29 Å
R-Value Free: 0.221 (Depositor), 0.228 (DCC)
R-Value Work: 0.185 (Depositor), 0.194 (DCC)
R-Value Observed: 0.187 (Depositor)

Space Group: P 6₃

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 60.34	α = 90
b = 60.34	β = 90
c = 192.6	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
PDB_EXTRACT	data extraction
XDS	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2021-12-29

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	--

Revision History (Full details and data files)

Version 1.0: 2021-12-29
Type: Initial release
Version 1.1: 2023-11-29
Changes: Data collection, Refinement description

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.