7VRP | pdb_00007vrp

Structure of infectious bursal disease virus Gx strain

PDB DOI: https://doi.org/10.2210/pdb7VRP/pdb
EM Map EMD-32102: EMDB EMDataResource

Classification: VIRUS
Organism(s): Infectious bursal disease virus
Mutation(s): No

Deposited: 2021-10-23 Released: 2022-03-30
Deposition Author(s): Bao, K.Y., Zhu, P.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.80 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 7VRP

This is version 1.1 of the entry. See complete history.

Literature

Cryo-EM structures of infectious bursal disease viruses with different virulences provide insights into their assembly and invasion

Bao, K., Qi, X., Lia, Y., Gong, M., Wang, M., Zhu, P.

(2022) Sci Bull (Beijing) 67: 646-654

DOI: https://doi.org/10.1016/j.scib.2021.12.009

Macromolecule Content

Total Structure Weight: 611.38 kDa
Atom Count: 41,042
Modeled Residue Count: 5,466
Deposited Residue Count: 5,733
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Structural polyprotein	A B [auth L] C [auth M] D [auth K] E [auth I] A, B [auth L], C [auth M], D [auth K], E [auth I], F, G [auth E], H [auth C], I [auth H], J, K [auth D], L [auth G], M [auth B]	441	Infectious bursal disease virus	Mutation(s): 0 EC: 3.4.21
UniProt
Find proteins for Q82635 (Avian infectious bursal disease virus (isolate Chicken/UK/UK661/1989)) Explore Q82635 Go to UniProtKB: Q82635
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q82635
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.80 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2022-03-30

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31430087
National Natural Science Foundation of China (NSFC)	China	31425007

Revision History (Full details and data files)

Version 1.0: 2022-03-30
Type: Initial release
Version 1.1: 2024-06-26
Changes: Data collection

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.