7VM2 | pdb_00007vm2

GluK3 D759G mutant receptor complex with UBP310 and spermine

PDB DOI: https://doi.org/10.2210/pdb7VM2/pdb
EM Map EMD-32032: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Rattus norvegicus
Expression System: Homo sapiens
Mutation(s): Yes
Membrane Protein: Yes OPMPDBTMMemProtMD

Deposited: 2021-10-06 Released: 2022-10-19
Deposition Author(s): Assaiya, A., Kumar, J.
Funding Organization(s): Science and Engineering Research Board (SERB)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 5.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

GluK3 D759G mutant receptor in complex with UBP310 and Spermine

Assaiya, A., Kumar, J.

To be published.

Macromolecule Content

Total Structure Weight: 364.99 kDa
Atom Count: 23,286
Modeled Residue Count: 2,926
Deposited Residue Count: 3,236
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glutamate receptor ionotropic, kainate 3	A, B, C, D	809	Rattus norvegicus	Mutation(s): 4 Gene Names: Grik3, Glur7 Membrane Entity: Yes
UniProt
Find proteins for P42264 (Rattus norvegicus) Explore P42264 Go to UniProtKB: P42264
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P42264
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 5.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-10-19

Deposition Author(s):

Funding Organization	Location	Grant Number
Science and Engineering Research Board (SERB)	India	CRG/2020/003971

Revision History (Full details and data files)

Version 1.0: 2022-10-19
Type: Initial release
Version 1.1: 2024-11-20
Changes: Data collection, Structure summary

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.