7VIM

The C-terminal DNA binding domain of EsrB from Edwardsiella piscicida


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.281 
  • R-Value Work: 0.229 
  • R-Value Observed: 0.232 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The C-terminal DNA binding domain of EsrB from Edwardsiella piscicida

Liu, B.Reverter, D.Shao, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Protein EsrB
A, B
72Edwardsiella piscicidaMutation(s): 0 
Gene Names: EVK84_02890MA13_contig00007-0127
UniProt
Find proteins for A0A034T5T1 (Edwardsiella piscicida)
Explore A0A034T5T1 
Go to UniProtKB:  A0A034T5T1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A034T5T1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.281 
  • R-Value Work: 0.229 
  • R-Value Observed: 0.232 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 39.111α = 90
b = 58.051β = 90
c = 81.043γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XSCALEdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Spanish Ministry of Economy and CompetitivenessSpainBFU2015-66417-P (MINECO/FEDER)

Revision History  (Full details and data files)

  • Version 1.0: 2022-09-28
    Type: Initial release