7U6R
Cryo-EM structure of PDF-2180 Spike glycoprotein
- PDB DOI: https://doi.org/10.2210/pdb7U6R/pdb
- EM Map EMD-26378: EMDB EMDataResource
- Classification: VIRAL PROTEIN
- Organism(s): Bat coronavirus
- Expression System: Homo sapiens
- Mutation(s): No 
- Deposited: 2022-03-05 Released: 2022-11-30 
- Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.50 Å
- Aggregation State: PARTICLE 
- Reconstruction Method: SINGLE PARTICLE 
wwPDB Validation   3D Report Full Report
This is version 1.2 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
PDF-2180 Spike glycoprotein | 1,337 | Bat coronavirus | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A0A1W6ASU7 (Bat coronavirus) Explore A0A1W6ASU7  Go to UniProtKB:  A0A1W6ASU7 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A1W6ASU7 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | AA [auth B] BA [auth B] CA [auth B] DA [auth B] EA [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.50 Å
- Aggregation State: PARTICLE 
- Reconstruction Method: SINGLE PARTICLE 
Entry History & Funding Information
Deposition Data
- Released Date: 2022-11-30  Deposition Author(s): Tortorici, M.A., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | -- |
Revision History (Full details and data files)
- Version 1.0: 2022-11-30
Type: Initial release - Version 1.1: 2022-12-28
Changes: Database references - Version 1.2: 2023-01-04
Changes: Database references