Structural basis for calcium-induced thermostability of human vitronectin
Tian, Y., Shin, K., Aleshin, A.E., Marassi, F.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
vitronectin | 204 | Homo sapiens | Mutation(s): 0  Gene Names: VTN | ![]() | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 (Subject of Investigation/LOI) Query on SO4 | F [auth A], G [auth A], H [auth A], L [auth B], M [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CL (Subject of Investigation/LOI) Query on CL | E [auth A], K [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | |||
NA (Subject of Investigation/LOI) Query on NA | C [auth A], D [auth A], I [auth B], J [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 40.582 | α = 90 |
b = 124.905 | β = 119.5 |
c = 40.778 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/Eunice Kennedy Shriver National Institute of Child Health & Human Development (NIH/NICHD) | United States | -- |