7TE8

CA14-CBD-DB21 ternary complex

  • Classification: BIOSYNTHETIC PROTEIN
  • Organism(s): artificial sequences
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2022-01-04 Released: 2022-01-12 
  • Deposition Author(s): Cao, S., Zheng, N.
  • Funding Organization(s): Howard Hughes Medical Institute (HHMI), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), National Institutes of Health/National Institute on Drug Abuse (NIH/NIDA)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.180 
  • R-Value Observed: 0.182 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Defining Molecular Glues with A Dual-Nanobody Cannabidiol Sensor

Cao, S.Kang, S.Mao, H.Yao, J.Gu, L.Zheng, N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
CA14A [auth C], C [auth D]120artificial sequencesMutation(s): 0 
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
DB21B [auth A], D [auth B]120artificial sequencesMutation(s): 0 
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
P0T (Subject of Investigation/LOI)
Query on P0T

Download Ideal Coordinates CCD File 
E [auth C], F [auth D]cannabidiol
C21 H30 O2
QHMBSVQNZZTUGM-ZWKOTPCHSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.180 
  • R-Value Observed: 0.182 
  • Space Group: P 2 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 62.672α = 90
b = 69.153β = 90
c = 109.11γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment  



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2022-01-04 
  • Released Date: 2022-01-12 
  • Deposition Author(s): Cao, S., Zheng, N.

Funding OrganizationLocationGrant Number
Howard Hughes Medical Institute (HHMI)United States--
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States1R35GM128918
National Institutes of Health/National Institute on Drug Abuse (NIH/NIDA)United StatesR21DA051555
National Institutes of Health/National Institute on Drug Abuse (NIH/NIDA)United StatesR21DA051194

Revision History  (Full details and data files)

  • Version 1.0: 2022-01-12
    Type: Initial release