7RUJ

E. coli cysteine desulfurase SufS N99A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.193 
  • R-Value Observed: 0.194 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Contributions of the active site floor in cysteine desulfurase activity

Conte, J.Gogar, R.Dunkle, J.Patrick, F.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Cysteine desulfuraseA406Escherichia coliMutation(s): 1 
Gene Names: 
sufSAM464_26295AUQ13_12030BANRA_00144BANRA_00498BUE81_02100BvCms2454_03222BvCmsHHP056_00376BvCmsKKP036_02154BvCmsKSP026_00913BW690_21095C2U48_26455C3F40_02340C5F72_12470C5F73_16550CA593_19565CI694_12360D0X26_02680D3821_13970D9D44_08095D9I97_06950D9J52_00990DJ503_04985DT034_04565E2119_03595E4K51_04160E4K53_02750E4K55_02210EA213_01125EAI52_07715EC3234A_33c01830ECTO6_02268EEP23_12650EI021_02920EI041_09080EIZ93_02005EL75_1975EL79_2015ETECE1441_02263ETECE925_02258EYD11_10615EYV18_16700F1E19_09770F9X20_017695F9X20_17865FKC84_00740FRV13_11320FV293_04975G5688_08175G5696_08550GHD50_00995GKF86_07510GKF89_05190GQE33_02870GQE34_20940GQE67_02970GRW02_06095GRW05_00495GRW57_07250GRW81_10520H4P50_11345H4P51_11710HH707_000397HLT96_01805HLU13_01505HMQ05_01935HNN86_11820HNO08_06140HNV44_03825HV065_07405HVV53_04920HVX22_10640HVX24_10540HVY79_11755HVY93_10710HVZ24_10295HX136_13565NCTC10429_03516NCTC13148_01082NCTC8500_02620NCTC9045_02773NCTC9062_00321NCTC9073_05651RK56_009090SAMEA3472047_04360SAMEA3472080_01352SAMEA3484427_00841SAMEA3484429_00952SAMEA3752559_02324SAMEA3753300_02697SK85_01902WP2S18E08_22360WP7S17E04_19980BGM66_002535BJI68_25010BO068_000121BON80_05820BON89_17860CTR35_001713CX938_001907D4M65_05600EYX47_02170F9V24_02070FOI11_004655FOI11_15390FQF29_11780GAI66_01170GF699_01295GIB53_00895GJO56_03555GNW61_13795HMV95_01255J0541_000536JNP96_14730NCTC9037_02543

EC: 2.8.1.7 (PDB Primary Data), 4.4.1.16 (PDB Primary Data)
UniProt
Find proteins for A0A090LEQ9 (Escherichia coli)
Explore A0A090LEQ9 
Go to UniProtKB:  A0A090LEQ9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A090LEQ9
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PLP (Subject of Investigation/LOI)
Query on PLP

Download Ideal Coordinates CCD File 
C [auth A]PYRIDOXAL-5'-PHOSPHATE
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

Download Ideal Coordinates CCD File 
B [auth A]CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.219 
  • R-Value Work: 0.193 
  • R-Value Observed: 0.194 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 125.229α = 90
b = 125.229β = 90
c = 137.429γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
CrysalisProdata reduction
PHENIXphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2023-01-25
    Type: Initial release