SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
Sluchanko, N.N., Tugaeva, K.V., Smith, J.L.R., Antson, A.A.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
14-3-3 protein sigma | 234 | Homo sapiens | Mutation(s): 3  Gene Names: SFN, HME1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P31947 (Homo sapiens) Explore P31947  Go to UniProtKB:  P31947 | |||||
PHAROS:  P31947 GTEx:  ENSG00000175793  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P31947 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
SER-SER-ARG-ASN-SEP-THR-PRO-GLY | C [auth E], D [auth F] | 8 | Severe acute respiratory syndrome coronavirus 2 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for P0DTC9 (Severe acute respiratory syndrome coronavirus 2) Explore P0DTC9  Go to UniProtKB:  P0DTC9 | |||||
Entity Groups   | |||||
UniProt Group | P0DTC9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TRS Query on TRS | N [auth B] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O | |||
PEG Query on PEG | E [auth A], F [auth A], K [auth B], L [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | G [auth A], M [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
BR Query on BR | H [auth A], I [auth A], J [auth A], O [auth B] | BROMIDE ION Br CPELXLSAUQHCOX-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
SEP Query on SEP | C [auth E], D [auth F] | L-PEPTIDE LINKING | C3 H8 N O6 P | SER |
Length ( Å ) | Angle ( ˚ ) |
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a = 47.438 | α = 90 |
b = 111.274 | β = 90 |
c = 115.17 | γ = 90 |
Software Name | Purpose |
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BUSTER | refinement |
DIALS | data reduction |
DIALS | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Russian Science Foundation | Russian Federation | 19-74-10031 |