Crystal structure of tandem domain RRM1-2 of FIR bound to FUSE ssDNA fragment
Ni, X., Joerger, A.C., Chaikuad, A., Knapp, S., Structural Genomics Consortium (SGC)To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Poly(U)-binding-splicing factor PUF60 | 199 | Homo sapiens | Mutation(s): 0  Gene Names: PUF60, FIR, ROBPI, SIAHBP1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UHX1 (Homo sapiens) Explore Q9UHX1  Go to UniProtKB:  Q9UHX1 | |||||
PHAROS:  Q9UHX1 GTEx:  ENSG00000179950  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9UHX1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (5'-D(P*GP*T)-3') | C [auth D] | 2 | Homo sapiens | ||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
ssDNA | D [auth E] | 2 | Homo sapiens | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | E [auth B], F [auth B], G [auth B], H [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 55.696 | α = 90 |
b = 69.785 | β = 90 |
c = 107.158 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |