7Q3D

Structure of the human CPLANE complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.35 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structure of the ciliogenesis-associated CPLANE complex.

Langousis, G.Cavadini, S.Boegholm, N.Lorentzen, E.Kempf, G.Matthias, P.

(2022) Sci Adv 8: eabn0832-eabn0832

  • DOI: https://doi.org/10.1126/sciadv.abn0832
  • Primary Citation of Related Structures:  
    7Q3D, 7Q3E

  • PubMed Abstract: 

    Dysfunctional cilia cause pleiotropic human diseases termed ciliopathies. These hereditary maladies are often caused by defects in cilia assembly, a complex event that is regulated by the ciliogenesis and planar polarity effector (CPLANE) proteins Wdpcp, Inturned, and Fuzzy. CPLANE proteins are essential for building the cilium and are mutated in multiple ciliopathies, yet their structure and molecular functions remain elusive. Here, we show that mammalian CPLANE proteins comprise a bona fide complex and report the near-atomic resolution structures of the human Wdpcp-Inturned-Fuzzy complex and of the mouse Wdpcp-Inturned-Fuzzy complex bound to the small guanosine triphosphatase Rsg1. Notably, the crescent-shaped CPLANE complex binds phospholipids such as phosphatidylinositol 3-phosphate via multiple modules and a CPLANE ciliopathy mutant exhibits aberrant lipid binding. Our study provides critical structural and functional insights into an enigmatic ciliogenesis-associated complex as well as unexpected molecular rationales for ciliopathies.


  • Organizational Affiliation

    Friedrich Miescher Institute for Biomedical Research, 4058 Basel, Switzerland.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
WD repeat-containing and planar cell polarity effector protein fritz homolog790Homo sapiensMutation(s): 0 
Gene Names: WDPCPBBS15C2orf86FRITZ
UniProt & NIH Common Fund Data Resources
Find proteins for O95876 (Homo sapiens)
Explore O95876 
Go to UniProtKB:  O95876
PHAROS:  O95876
GTEx:  ENSG00000143951 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO95876
Sequence Annotations
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Protein inturned964Homo sapiensMutation(s): 0 
Gene Names: INTUKIAA1284PDZD6PDZK6
UniProt & NIH Common Fund Data Resources
Find proteins for Q9ULD6 (Homo sapiens)
Explore Q9ULD6 
Go to UniProtKB:  Q9ULD6
PHAROS:  Q9ULD6
GTEx:  ENSG00000164066 
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Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9ULD6
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  • Reference Sequence
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Protein fuzzy homolog418Homo sapiensMutation(s): 0 
Gene Names: FUZFY
UniProt & NIH Common Fund Data Resources
Find proteins for Q9BT04 (Homo sapiens)
Explore Q9BT04 
Go to UniProtKB:  Q9BT04
PHAROS:  Q9BT04
GTEx:  ENSG00000010361 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9BT04
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.35 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTRosetta
MODEL REFINEMENTISOLDE
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Swiss National Science Foundation--

Revision History  (Full details and data files)

  • Version 1.0: 2022-04-06
    Type: Initial release
  • Version 1.1: 2022-04-13
    Changes: Database references
  • Version 1.2: 2022-04-27
    Changes: Database references