7PL9

Cryo-EM structure of Bestrhodopsin (rhodopsin-rhodopsin-bestrophin) complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.21 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Rhodopsin-bestrophin fusion proteins from unicellular algae form gigantic pentameric ion channels.

Rozenberg, A.Kaczmarczyk, I.Matzov, D.Vierock, J.Nagata, T.Sugiura, M.Katayama, K.Kawasaki, Y.Konno, M.Nagasaka, Y.Aoyama, M.Das, I.Pahima, E.Church, J.Adam, S.Borin, V.A.Chazan, A.Augustin, S.Wietek, J.Dine, J.Peleg, Y.Kawanabe, A.Fujiwara, Y.Yizhar, O.Sheves, M.Schapiro, I.Furutani, Y.Kandori, H.Inoue, K.Hegemann, P.Beja, O.Shalev-Benami, M.

(2022) Nat Struct Mol Biol 29: 592-603

  • DOI: https://doi.org/10.1038/s41594-022-00783-x
  • Primary Citation of Related Structures:  
    7PL9

  • PubMed Abstract: 

    Many organisms sense light using rhodopsins, photoreceptive proteins containing a retinal chromophore. Here we report the discovery, structure and biophysical characterization of bestrhodopsins, a microbial rhodopsin subfamily from marine unicellular algae, in which one rhodopsin domain of eight transmembrane helices or, more often, two such domains in tandem, are C-terminally fused to a bestrophin channel. Cryo-EM analysis of a rhodopsin-rhodopsin-bestrophin fusion revealed that it forms a pentameric megacomplex (~700 kDa) with five rhodopsin pseudodimers surrounding the channel in the center. Bestrhodopsins are metastable and undergo photoconversion between red- and green-absorbing or green- and UVA-absorbing forms in the different variants. The retinal chromophore, in a unique binding pocket, photoisomerizes from all-trans to 11-cis form. Heterologously expressed bestrhodopsin behaves as a light-modulated anion channel.


  • Organizational Affiliation

    Faculty of Biology, Technion - Israel Institute of Technology, Haifa, Israel.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Rhodopsin
A, B, C, D, E
1,187PhaeocystisMutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.21 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2022-07-06
    Type: Initial release