7P0E

Crystal structure of human filamin C domains 14-15 cardiovascular disease causing mutation G1676R

• PDB DOI: https://doi.org/10.2210/pdb7P0E/pdb

• Classification: STRUCTURAL PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2021-06-29 Released: 2022-07-13 
• Deposition Author(s): Mlynek, G., Djinovic-Carugo, K.

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.60 Å
• R-Value Free: 0.221 
• R-Value Work: 0.187 
• R-Value Observed: 0.188 

Literature

Analysis and prediction of pathogenic missense variants in human filamin C

Mlynek, G., Djinovic-Carugo, K.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: light scattering

Macromolecule Content

• Total Structure Weight: 43.59 kDa 
• Atom Count: 3,376 
• Modelled Residue Count: 404 
• Deposited Residue Count: 410 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Isoform 2 of Filamin-C	A, B	205	Homo sapiens	Mutation(s): 1  Gene Names: FLNC, ABPL, FLN2
UniProt & NIH Common Fund Data Resources
Find proteins for Q14315 (Homo sapiens) Explore Q14315  Go to UniProtKB:  Q14315
PHAROS:  Q14315 GTEx:  ENSG00000128591

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
GOL	C [auth A], E [auth B], F [auth B], G [auth B]	GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
EDO	D [auth A]	1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.60 Å
• R-Value Free: 0.221 
• R-Value Work: 0.187 
• R-Value Observed: 0.188 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 39.15	α = 90
b = 59.46	β = 90
c = 180.07	γ = 90

Software Package:

Software Name	Purpose
EDNA	data collection
MxCuBE	data collection
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing
Coot	model building
PDB-REDO	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2022-07-13 
Deposition Author(s): Mlynek, G., Djinovic-Carugo, K.

Revision History  

• Version 1.0: 2022-07-13
  Type: Initial release
  
• Version 1.1: 2024-01-31
  Changes: Data collection, Refinement description