Download MendeleyCrystal structure of Human Menin with fragment 16
Groves, M.R., Gao, K.To be published.
7O9X
Crystal structure of Human Menin with fragment 16
- PDB DOI: https://doi.org/10.2210/pdb7O9X/pdb
- Classification: ONCOPROTEIN
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2021-04-17 Released: 2022-07-27
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.249
- R-Value Work: 0.198
- R-Value Observed: 0.201
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Menin | 494 | Homo sapiens | Mutation(s): 0 Gene Names: MEN1, hCG_2017452 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O00255 (Homo sapiens) Explore O00255 Go to UniProtKB: O00255 | |||||
PHAROS: O00255 GTEx: ENSG00000133895 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O00255 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| V6Q (Subject of Investigation/LOI) Query on V6Q | B [auth A] | (2-methoxyphenyl)methanamine C8 H11 N O PXJACNDVRNAFHD-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | C [auth A], G [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| EDO Query on EDO | D [auth A], E [auth A], F [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.249
- R-Value Work: 0.198
- R-Value Observed: 0.201
- Space Group: P 43 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 107.063 | α = 90 |
| b = 107.063 | β = 90 |
| c = 107.243 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| Aimless | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| PHENIX | phasing |
Entry History
Deposition Data
- Released Date: 2022-07-27 Deposition Author(s): Groves, M.R., Gao, K.
Revision History (Full details and data files)
- Version 1.0: 2022-07-27
Type: Initial release - Version 1.1: 2024-01-31
Changes: Data collection, Refinement description
