7M92 | pdb_00007m92

Crystal structure of unknown function protein protein B9J08_000055 Candida auris

PDB DOI: https://doi.org/10.2210/pdb7M92/pdb

Classification: STRUCTURAL GENOMICS
Organism(s): Candidozyma auris
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2021-03-30 Released: 2021-04-07
Deposition Author(s): Chang, C., Evdokimova, E., Savchenko, A., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.35 Å
R-Value Free:
0.247 (Depositor), 0.247 (DCC)
R-Value Work:
0.199 (Depositor), 0.199 (DCC)
R-Value Observed:
0.201 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Validation slider image for 7M92

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of unknown function protein protein B9J08_000055 Candida auris

Chang, C., Evdokimova, E., Savchenko, A., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecule Content

Total Structure Weight: 77.27 kDa
Atom Count: 5,692
Modeled Residue Count: 716
Deposited Residue Count: 718
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Homoserine dehydrogenase	A, B	359	Candidozyma auris	Mutation(s): 1 Gene Names: B9J08_000055 EC: 1.1.1.3
UniProt
Find proteins for A0A2H1A6V9 (Candidozyma auris) Explore A0A2H1A6V9 Go to UniProtKB: A0A2H1A6V9
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A2H1A6V9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.35 Å
R-Value Free: 0.247 (Depositor), 0.247 (DCC)
R-Value Work: 0.199 (Depositor), 0.199 (DCC)
R-Value Observed: 0.201 (Depositor)

Diffraction Data:

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 52.263	α = 90
b = 111.925	β = 90
c = 124.207	γ = 90

Software Package:

Software Name	Purpose
SCALEPACK	data scaling
SBC-Collect	data collection
PHENIX	refinement
PDB_EXTRACT	data extraction
HKL-3000	data reduction
MOLREP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2021-04-07

Deposition Author(s):

Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History (Full details and data files)

Version 1.0: 2021-04-07
Type: Initial release
Version 1.1: 2023-10-18
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.