7M0G | pdb_00007m0g

Magic Angle Spinning NMR Structure of Human Cofilin-2 Assembled on Actin Filaments


Experimental Data Snapshot

  • Method: SOLID-STATE NMR
  • Conformers Calculated: 250 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report

Validation slider image for 7M0G

This is version 1.3 of the entry. See complete history

Literature

Magic angle spinning NMR structure of human cofilin-2 assembled on actin filaments reveals isoform-specific conformation and binding mode.

Kraus, J.Russell, R.W.Kudryashova, E.Xu, C.Katyal, N.Perilla, J.R.Kudryashov, D.S.Polenova, T.

(2022) Nat Commun 13: 2114-2114

  • DOI: https://doi.org/10.1038/s41467-022-29595-9
  • Primary Citation Related Structures: 
    7M0G, 7U8K

  • PubMed Abstract: 

    Actin polymerization dynamics regulated by actin-binding proteins are essential for various cellular functions. The cofilin family of proteins are potent regulators of actin severing and filament disassembly. The structural basis for cofilin-isoform-specific severing activity is poorly understood as their high-resolution structures in complex with filamentous actin (F-actin) are lacking. Here, we present the atomic-resolution structure of the muscle-tissue-specific isoform, cofilin-2 (CFL2), assembled on ADP-F-actin, determined by magic-angle-spinning (MAS) NMR spectroscopy and data-guided molecular dynamics (MD) simulations. We observe an isoform-specific conformation for CFL2. This conformation is the result of a unique network of hydrogen bonding interactions within the α2 helix containing the non-conserved residue, Q26. Our results indicate F-site interactions that are specific between CFL2 and ADP-F-actin, revealing mechanistic insights into isoform-dependent F-actin disassembly.


  • Organizational Affiliation
    • Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, 19716, United States.

Macromolecule Content 

  • Total Structure Weight: 18.77 kDa 
  • Atom Count: 1,317 
  • Modeled Residue Count: 166 
  • Deposited Residue Count: 166 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Cofilin-2166Homo sapiensMutation(s): 0 
Gene Names: CFL2
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y281 (Homo sapiens)
Explore Q9Y281 
Go to UniProtKB:  Q9Y281
PHAROS:  Q9Y281
GTEx:  ENSG00000165410 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Y281
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: SOLID-STATE NMR
  • Conformers Calculated: 250 
  • Conformers Submitted: 10 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, United States)United States1247394
National Science Foundation (NSF, United States)United StatesCHE0959496
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesP30GM110758

Revision History  (Full details and data files)

  • Version 1.0: 2022-04-20
    Type: Initial release
  • Version 1.1: 2022-05-04
    Changes: Database references
  • Version 1.2: 2023-06-14
    Changes: Other
  • Version 1.3: 2024-05-15
    Changes: Data collection, Database references