7LZL | pdb_00007lzl

Solution NMR structure of an avian defensin, AvBD3, from mallard

• PDB DOI: https://doi.org/10.2210/pdb7LZL/pdb
• BMRB: 30876

• Classification: ANTIMICROBIAL PROTEIN
• Organism(s): Anas platyrhynchos
• Mutation(s): No 
• Membrane Protein: Yes  OPM


• Deposited: 2021-03-10 Released: 2021-08-11 
• Deposition Author(s): Rosengren, K.J., Andersson, H.S.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 20 
• Selection Criteria: structures with favorable non-bond energy 

Literature

Relation between structure and function of three avian beta-defensin 3b variants from mallard (Anas platyrhynchos)

Helin, A.S., Chapman, J.R., Tolf, C., Aarts, L., Bususu, I., Rosengren, K.J., Andersson, H.S., Waldenstrom, J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 4.19 kDa 
• Atom Count: 289 
• Modeled Residue Count: 37 
• Deposited Residue Count: 37 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Avian beta-defensin 3	A	37	Anas platyrhynchos	Mutation(s): 0  Membrane Entity: Yes
UniProt
Find proteins for A0A493T764 (Anas platyrhynchos platyrhynchos) Explore A0A493T764  Go to UniProtKB:  A0A493T764

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 50 
• Conformers Submitted: 20 
• Selection Criteria: structures with favorable non-bond energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2021-08-11 
Deposition Author(s): Rosengren, K.J., Andersson, H.S.

Revision History  

• Version 1.0: 2021-08-11
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Other
• Version 1.2: 2024-10-16
  Changes: Data collection, Database references, Structure summary