Intermediates in allosteric equilibria of DnaK-ATP interactions with substrate peptides
Wang, W., Hendrickson, W.A.(2021) Acta Crystallogr D Biol Crystallogr 77: 606-617
Experimental Data Snapshot
Starting Model: experimental
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(2021) Acta Crystallogr D Biol Crystallogr 77: 606-617
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Chaperone protein DnaK fused with substrate peptide,Chaperone protein DnaK fused with substrate peptide | 552 | Escherichia coli K-12 | Mutation(s): 1  Gene Names: dnaK, FAZ83_07380 | ||
UniProt | |||||
Find proteins for P0A6Y8 (Escherichia coli (strain K12)) Explore P0A6Y8  Go to UniProtKB:  P0A6Y8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A6Y8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP (Subject of Investigation/LOI) Query on ATP | B [auth A] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
SO4 Query on SO4 | F [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | D [auth A], E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
MG Query on MG | C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 145.135 | α = 90 |
b = 145.135 | β = 90 |
c = 122.212 | γ = 120 |
Software Name | Purpose |
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PHENIX | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | GM107462 |