7KRM | pdb_00007krm

Putative FabG bound to NADH from Acinetobacter baumannii

• PDB DOI: https://doi.org/10.2210/pdb7KRM/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Acinetobacter baumannii
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-11-20 Released: 2020-12-30 
• Deposition Author(s): Shaw, K.I., Smith, K.M., Cross, E.M.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free: 
  0.174 (Depositor), 0.170 (DCC) 
• R-Value Work: 
  0.150 (Depositor), 0.150 (DCC) 
• R-Value Observed: 
  0.152 (Depositor) 

Starting Model: experimental

Literature

Putative FabG bound to NADH from Acinetobacter baumannii

Forwood, J.K.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 106.1 kDa 
• Atom Count: 7,904 
• Modeled Residue Count: 956 
• Deposited Residue Count: 1,000 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
3-oxoacyl-[acyl-carrier-protein] reductase	A, B, C, D	250	Acinetobacter baumannii	Mutation(s): 0  Gene Names: fabG_1, ABC003_00909, ABUW_2930, DLI69_07500, EA686_12865, FDO31_05475, GNY86_08660 EC: 1.1.1.47
UniProt
Find proteins for A0A077GFB1 (Acinetobacter baumannii) Explore A0A077GFB1  Go to UniProtKB:  A0A077GFB1

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
NAD (Subject of Investigation/LOI)	E [auth A], F [auth B], G [auth C], H [auth D]	NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Free:  0.174 (Depositor), 0.170 (DCC) 
• R-Value Work:  0.150 (Depositor), 0.150 (DCC) 
• R-Value Observed: 0.152 (Depositor) 

Space Group: H 3

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 189.872	α = 90
b = 189.872	β = 90
c = 71.981	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
PHENIX	refinement
Aimless	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-12-30 
Deposition Author(s): Shaw, K.I., Smith, K.M., Cross, E.M.

Revision History  

• Version 1.0: 2020-12-30
  Type: Initial release
  
• Version 1.1: 2023-10-18
  Changes: Data collection, Database references, Refinement description