7JJK

Crystal structure of SOX30

• PDB DOI: https://doi.org/10.2210/pdb7JJK/pdb

• Classification: TRANSCRIPTION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-07-27 Released: 2020-08-19 
• Deposition Author(s): Ghafoori, S.M., Forwood, J.K.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 0.199 
• R-Value Work: 0.174 
• R-Value Observed: 0.175 

Literature

Structure of SOX30 at 1.40 Angstroms resolution

Ghafoori, S.M., Forwood, J.K.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 10.5 kDa 
• Atom Count: 647 
• Modelled Residue Count: 71 
• Deposited Residue Count: 90 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Transcription factor SOX-30	A	90	Homo sapiens	Mutation(s): 0  Gene Names: SOX30
UniProt & NIH Common Fund Data Resources
Find proteins for O94993 (Homo sapiens) Explore O94993  Go to UniProtKB:  O94993
PHAROS:  O94993 GTEx:  ENSG00000039600

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.40 Å
• R-Value Free: 0.199 
• R-Value Work: 0.174 
• R-Value Observed: 0.175 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 33.77	α = 90
b = 35.7	β = 90
c = 52.91	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PHENIX	refinement
Aimless	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-08-19 
Deposition Author(s): Ghafoori, S.M., Forwood, J.K.

Revision History  

• Version 1.0: 2020-08-19
  Type: Initial release
  
• Version 1.1: 2023-10-18
  Changes: Data collection, Database references, Refinement description