PanDDA analysis group deposition
Kim, Y., Marples, P., Fearon, D., von Delft, F., Knapp, S., Kraemer, A., Structural Genomics Consortium (SGC)To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
E3 ubiquitin-protein ligase TRIM21 | A [auth B] | 188 | Mus musculus | Mutation(s): 0  Gene Names: Trim21, Ro52, Ssa1 EC: 2.3.2.27 | |
UniProt | |||||
Find proteins for Q62191 (Mus musculus) Explore Q62191  Go to UniProtKB:  Q62191 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q62191 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
A1BFG (Subject of Investigation/LOI) Query on A1BFG | B | N-{[2-(dimethylamino)pyridin-4-yl]methyl}acetamide C10 H15 N3 O BKIVWGJUNJZCKF-UHFFFAOYSA-N | |||
SO4 Query on SO4 | D [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO Query on EDO | C [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 95.505 | α = 90 |
b = 95.505 | β = 90 |
c = 45.808 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
REFMAC | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
European Union (EU) | European Union | 875510 |