7F8M

Roadblock from Thorarchaeota SMTZ1-45

• PDB DOI: https://doi.org/10.2210/pdb7F8M/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Candidatus Thorarchaeota archaeon SMTZ1-45
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2021-07-02 Released: 2022-07-13 
• Deposition Author(s): Robinson, R.C., Tran, L.T.
• Funding Organization(s): Japan Science and Technology, Japan Society for the Promotion of Science (JSPS), Other private

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.14 Å
• R-Value Free: 0.260 
• R-Value Work: 0.191 

Literature

Roadblock from Thorarchaeota SMTZ1-45

Tran, L.T., Robinson, R.C.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: homology

Biological Assembly 2  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 2 assigned by authors and generated by PISA (software)

Biological Assembly 3  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 3 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 76.5 kDa 
• Atom Count: 5,589 
• Modelled Residue Count: 702 
• Deposited Residue Count: 720 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Robl_LC7 domain-containing protein	A, B, C, D, E, F	120	Candidatus Thorarchaeota archaeon SMTZ1-45	Mutation(s): 0  Gene Names: AM325_09185
UniProt
Find proteins for A0A135VIJ8 (Candidatus Thorarchaeota archaeon SMTZ1-45) Explore A0A135VIJ8  Go to UniProtKB:  A0A135VIJ8

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.14 Å
• R-Value Free: 0.260 
• R-Value Work: 0.191 
• Space Group: P 3₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.982	α = 90
b = 58.982	β = 90
c = 193.952	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2022-07-13 
Deposition Author(s): Robinson, R.C., Tran, L.T.

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Funding Organization	Location	Grant Number
Japan Science and Technology	Japan	JPMJCR19S5
Japan Society for the Promotion of Science (JSPS)	Japan	JP20H00476
Other private	United States	Moore and Simons foundations GBMF9743

Revision History  

• Version 1.0: 2022-07-13
  Type: Initial release