7ESG

Crystal structure of Haloarcula marismortui CheB with Glutathione S-transferase expression tag

PDB DOI: https://doi.org/10.2210/pdb7ESG/pdb

Classification: TRANSFERASE, HYDROLASE
Organism(s): Schistosoma japonicum, Haloarcula marismortui
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2021-05-10 Released: 2022-07-20
Deposition Author(s): Chen, K.L., Yang, C.S.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.53 Å
R-Value Free: 0.372
R-Value Work: 0.349
R-Value Observed: 0.361

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of Haloarcula marismortui CheB with Glutathione S-transferase expression tag

Chen, K.L., Yang, C.S.

To be published.

Macromolecule Content

Total Structure Weight: 65.41 kDa
Atom Count: 4,553
Modelled Residue Count: 589
Deposited Residue Count: 598
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glutathione S-transferase,Protein-glutamate methylesterase/protein-glutamine glutaminase	A	598	Schistosoma japonicum, Haloarcula marismortui This entity is chimeric	Mutation(s): 0
UniProt
Find proteins for P08515 (Schistosoma japonicum) Explore P08515 Go to UniProtKB: P08515
Find proteins for Q5V0B3 (Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)) Explore Q5V0B3 Go to UniProtKB: Q5V0B3
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Groups	Q5V0B3P08515
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.53 Å
R-Value Free: 0.372
R-Value Work: 0.349
R-Value Observed: 0.361
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.058	α = 90
b = 93.91	β = 90
c = 93.632	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
PHENIX	refinement
PHENIX	model building
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-07-20

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2022-07-20
Type: Initial release
Version 1.1: 2024-04-03
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.