7DCM

Crystal structure of CITX


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.171 
  • R-Value Observed: 0.179 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of CITX

Su, X.D.Xu, H.Wang, B.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Probable apo-citrate lyase phosphoribosyl-dephospho-CoA transferaseA186Escherichia coliMutation(s): 0 
Gene Names: 
citXybdUA9X72_17980ACN68_28335ACN81_02815ACU57_00715APX88_01390AW118_15180BER14_10980BGM66_000211BHS81_03625BJI68_22085BK292_19685BN17_04011BO068_002185BOH76_04290BON63_00475BON64_23115BON67_20275BON68_01715BON70_01515BON72_05675BON73_12780BON74_18320BON76_07680BON77_22285BON80_11565BON81_18125BON82_24250BON83_12575BON89_09705BON93_07570BON94_20220BON96_24055BRV02_002922BTQ06_00450BvCmsF30A_01324BvCmsKSNP073_03669BVL39_25500C1Q91_002501C2M16_19555C2R31_002641C5N07_14235C9114_15135C9160_01540C9E67_22610C9Z68_09460CA593_00030CCS08_17055CO706_25480CR538_18405CTR35_001997CWS33_17535CY655_03195D0X26_17955D9D43_19660D9D77_14070D9H94_25550D9J03_15210DAH18_16005DAH19_18845DAH21_14180DAH22_17225DAH23_13950DAH24_14410DAH25_14575DAH26_13975DAH27_06575DAH28_07885DAH32_03385DAH33_12355DAH34_14485DAH35_15180DAH36_15050DAH38_11870DAH40_14835DAH41_06735DAH42_07590DAH43_12175DAH45_12550DAH46_09705DAH47_12590DAH48_12350DAH49_11325DEN86_13325DEN91_16710DEN92_15855DEN94_12330DEN95_12735DEO01_03160DEO02_13215DEO14_16855DEO19_10725DEO20_08435DIV22_17885DRW19_14540DS732_08000DU321_01965E2113_22475E2117_04290E2119_08825E2121_08805E2127_07535E2128_06950E2129_17430E2132_18595E2133_03785E4K51_13345E4T14_15400E5M02_14270E5P30_09215E5P31_20365E5P32_16295E5P33_15830E5P34_22515E5P35_18580E5P39_21805E5P40_18360E5P41_20370E5P42_19050E5P43_19600E5P44_20185E5P45_20530E5P46_19970E5P47_10250E5P48_19705E5P49_21465E5P50_16120E5S35_15715E5S36_17625E5S38_16730E5S39_15435E5S42_16465E5S43_17025E5S44_16160E5S45_14030E5S51_16975E5S52_16540E5S56_17390E5S58_14515EAN77_09315EC95NR1_04849ECs0653EHD79_14475EI021_13280EKI52_07780EL79_3263EL80_3218ELT17_15135ELT20_11190ELT21_07460ELT27_14260ELT29_14845ELT41_13805ELU90_14080ELU99_15900ELV08_16015ELV09_17715ELV15_21865ELV21_04025ELV26_15545ELV28_11515ELX48_12680ELX61_10125ELX66_05615ELX85_16050ELX96_15315ELY02_09760ELY32_21130ELY36_24430ELY41_12485ELY48_23745EN85_002581EYV17_06170EYV18_15495F2N20_09720F2N31_09870F7N46_04450F9B07_13855F9S83_07330FJQ40_13585FKO60_16845FTV90_11415FTV92_10880FV293_12985FWK02_29905G3V95_14065G9448_07685GAI89_15735GJO56_14725GKF89_06185GNW61_05420GNZ05_00410GQM04_01840GRW05_19775GRW56_25490GSY44_09210HJU54_002975HL563_15345HLV18_06365HMV95_12360HNC66_17475HV209_03890I6H00_11610IA00_002256IH772_09190IT029_003725J0541_003060J5U05_002722JE86ST02C_06380JE86ST05C_06210JFD_01792JNP96_07455NCTC12950_03949NCTC13127_04898NCTC13148_06425NCTC4450_06979NCTC7927_04008NCTC8008_03181NCTC8500_04007NCTC8960_01047NCTC8985_02424NCTC9036_03641NCTC9037_03758NCTC9045_04137NCTC9073_02696NCTC9117_04460NCTC9777_03623RG28_01470SAMEA3472044_02413WP4S18E07_31930

EC: 2.7.7.61
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN (Subject of Investigation/LOI)
Query on ZN

Download Ideal Coordinates CCD File 
B [auth A]ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.171 
  • R-Value Observed: 0.179 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 43.017α = 90
b = 36.784β = 92.13
c = 48.265γ = 90
Software Package:
Software NamePurpose
HKL-2000data reduction
HKL-2000data scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
AutoSolphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-11-03
    Type: Initial release