7CWP

Root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens

• PDB DOI: https://doi.org/10.2210/pdb7CWP/pdb

• Classification: SIGNALING PROTEIN
• Organism(s): Trichoderma virens Gv29-8
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-08-29 Released: 2021-09-01 
• Deposition Author(s): Gupta, G.D.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 0.226 
• R-Value Work: 0.176 
• R-Value Observed: 0.178 

Literature

Crystal structure of root induced Secreted protein Tsp1 from Biocontrol fungi Trichoderma virens

Gupta, G.D.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 2 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 58.83 kDa 
• Atom Count: 4,268 
• Modelled Residue Count: 511 
• Deposited Residue Count: 552 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Root induced signalling protein	A, B, C, D	138	Trichoderma virens Gv29-8	Mutation(s): 0  Gene Names: TRIVIDRAFT_215947
UniProt
Find proteins for G9MQD3 (Hypocrea virens (strain Gv29-8 / FGSC 10586)) Explore G9MQD3  Go to UniProtKB:  G9MQD3

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 0.226 
• R-Value Work: 0.176 
• R-Value Observed: 0.178 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 45.2	α = 90
b = 66.7	β = 90
c = 168	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PDB_EXTRACT	data extraction
AutoSol	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2021-09-01 
Deposition Author(s): Gupta, G.D.

Revision History  

• Version 1.0: 2021-09-01
  Type: Initial release