7COG

Cholesterol esterase from Burkholderia stabilis (monoclinic crystal form)

  • Classification: HYDROLASE
  • Organism(s): Burkholderia stabilis
  • Mutation(s): No 
  • Membrane Protein: Yes  OPM

  • Deposited: 2020-08-04 Released: 2020-12-16 
  • Deposition Author(s): Yasutake, Y., Tamura, T.
  • Funding Organization(s): New Energy and Industrial Technology Development Organization (NEDO)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.237 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Bacterial triacylglycerol lipase is a potential cholesterol esterase: Identification of a key determinant for sterol-binding specificity.

Yasutake, Y.Konishi, K.Muramatsu, S.Yoshida, K.Aburatani, S.Sakasegawa, S.I.Tamura, T.

(2021) Int J Biol Macromol 167: 578-586


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Alpha/beta hydrolaseA, B, C, D320Burkholderia stabilisMutation(s): 0 
Gene Names: BSFP_052170
Membrane Entity: Yes 
UniProt
Find proteins for A0A1Y1BQV9 (Burkholderia stabilis)
Explore A0A1Y1BQV9 
Go to UniProtKB:  A0A1Y1BQV9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A1Y1BQV9
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.219 
  • R-Value Observed: 0.237 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 186.292α = 90
b = 47.092β = 90.05
c = 70.082γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
New Energy and Industrial Technology Development Organization (NEDO)Japan--

Revision History  (Full details and data files)

  • Version 1.0: 2020-12-16
    Type: Initial release