7C44

Crystal structure of the p53-binding domain of human MdmX protein in complex with Nutlin3a


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.207 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of the p53-binding domain of human MdmX protein in complex with Nutlin3a

Cheng, X.Y.Zhang, B.L.Kuang, Z.K.Yang, J.Li, Z.C.Yu, J.P.Zhao, Z.T.Cao, C.Z.Su, Z.D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Protein Mdm4 A96Homo sapiensMutation(s): 0 
Gene Names: MDM4MDMX
Find proteins for O15151 (Homo sapiens)
Explore O15151 
Go to UniProtKB:  O15151
NIH Common Fund Data Resources
PHAROS:  O15151
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NUT
Query on NUT

Download Ideal Coordinates CCD File 
A
4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one
C30 H30 Cl2 N4 O4
BDUHCSBCVGXTJM-WUFINQPMSA-N
 Ligand Interaction
O4B
Query on O4B

Download Ideal Coordinates CCD File 
A
1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE
C12 H24 O6
XEZNGIUYQVAUSS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.207 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 47.47α = 90
b = 47.47β = 90
c = 91.19γ = 90
Software Package:
Software NamePurpose
HKL-2000data reduction
Aimlessdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-06-17
    Type: Initial release