7BNA | pdb_00007bna

ANISOTROPIC THERMAL-PARAMETER REFINEMENT OF THE DNA DODECAMER CGCGAATTCGCG BY THE SEGMENTED RIGID-BODY METHOD

• PDB DOI: https://doi.org/10.2210/pdb7BNA/pdb
• NAKB: 7BNA

• Classification: DNA
• Mutation(s): No 


• Deposited: 1985-01-07 Released: 1985-07-17 
• Deposition Author(s): Holbrook, S.R., Dickerson, R.E., Kim, S.-H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Work: 
  0.190 (DCC) 
• R-Value Observed: 
  0.149 (Depositor) 

Literature

Anisotropic Thermal-Parameter Refinement of the DNA Dodecamer CGCGAATTCGCG by the Segmented Rigid-Body Method

Holbrook, S.R., Dickerson, R.E., Kim, S.-H.

(1985) Acta Crystallogr B 41: 255-262

Biological Assembly 1  

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 7.33 kDa 
• Atom Count: 564 
• Modeled Residue Count: 24 
• Deposited Residue Count: 24 
• Unique nucleic acid chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Length	Organism	Image
DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')	A, B	12	N/A

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.90 Å
• R-Value Work:  0.190 (DCC) 
• R-Value Observed: 0.149 (Depositor) 

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 24.87	α = 90
b = 40.39	β = 90
c = 66.2	γ = 90

Software Package:

Software Name	Purpose
CORELS	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 1985-07-17 
Deposition Author(s): Holbrook, S.R., Dickerson, R.E., Kim, S.-H.

Revision History  

• Version 1.0: 1985-07-17
  Type: Initial release
  
• Version 1.1: 2008-05-22
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2024-03-06
  Changes: Data collection, Database references