Download MendeleyCrystal structures of 3-hydroxydecanoyl-acyl carrier protein dehydratase (FabA) from Pseudomonas aeruginosa
Naismith, J.H., Moynie, L., Robinson, D.A.To be published.
7BK9 | pdb_00007bk9
Crystal structure of 3-hydroxydecanoyl-acyl carrier protein dehydratase (FabA) from Pseudomonas aeruginosa in complex with DDD00078426
- PDB DOI: https://doi.org/10.2210/pdb7BK9/pdb
- Classification: LYASE
- Organism(s): Pseudomonas aeruginosa PAO1
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2021-01-15 Released: 2022-03-02
- Funding Organization(s): European Communitys Seventh Framework Programme
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.94 Å
- R-Value Free: 0.226 (Depositor), 0.230 (DCC)
- R-Value Work: 0.199 (Depositor), 0.210 (DCC)
- R-Value Observed: 0.201 (Depositor)
Starting Model: experimental
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This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | A, B, C [auth D], D [auth C], E | 171 | Pseudomonas aeruginosa PAO1 | Mutation(s): 0 Gene Names: fabA, PA1610 EC: 4.2.1.59 (PDB Primary Data), 5.3.3.14 (PDB Primary Data) |  |
UniProt | |||||
Find proteins for O33877 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore O33877 Go to UniProtKB: O33877 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O33877 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| U0W (Subject of Investigation/LOI) Query on U0W | F [auth A] G [auth B] H [auth B] I [auth B] J [auth D] | 5-[(2,3-Dihydro-1H-inden-5-yloxy)methyl]-2-furoic acid C15 H14 O4 BQKLXOGKDTYPRT-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.94 Å
- R-Value Free: 0.226 (Depositor), 0.230 (DCC)
- R-Value Work: 0.199 (Depositor), 0.210 (DCC)
- R-Value Observed: 0.201 (Depositor)
Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 113.64 | α = 90 |
| b = 143.5 | β = 114.08 |
| c = 77.78 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| DIALS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-03-02 Deposition Author(s): Moynie, L., Naismith, J.H., Robinson, D.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| European Communitys Seventh Framework Programme | -- |
Revision History (Full details and data files)
- Version 1.0: 2022-03-02
Type: Initial release - Version 1.1: 2024-01-31
Changes: Data collection, Refinement description
