Download MendeleyA conserved isoleucine in the RNA sensor RIG-I controls immune tolerance to mitochondrial RNA
de Regt, A.K., Anand, K., Gatterdam, K., Hagelueken, G., Hartmann, G., Geyer, M., Schlee, M.To be published.
7BAH
Structure of RIG-I CTD bound to OH-RNA
- PDB DOI: 10.2210/pdb7BAH/pdb
- NDB: 7BAH
- Classification: IMMUNE SYSTEM
- Organism(s): Homo sapiens, synthetic construct
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2020-12-15 Released: 2022-01-12
- Funding Organization(s): German Research Foundation (DFG)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.89 Å
- R-Value Free: 0.224
- R-Value Work: 0.195
- R-Value Observed: 0.197
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Antiviral innate immune response receptor RIG-I | A, B | 127 | Homo sapiens | Mutation(s): 0 Gene Names: DDX58 EC: 3.6.4.13 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O95786 (Homo sapiens) Explore O95786 Go to UniProtKB: O95786 | |||||
PHAROS: O95786 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O95786 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Length | Organism | Image | |
| RNA (5'-R(*GP*AP*CP*GP*CP*UP*AP*GP*CP*GP*UP*C)-3') | C, D | 12 | synthetic construct |  | |
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | E [auth A], F [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.89 Å
- R-Value Free: 0.224
- R-Value Work: 0.195
- R-Value Observed: 0.197
- Space Group: P 65
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 81.92 | α = 90 |
| b = 81.92 | β = 90 |
| c = 111.87 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-01-12 Deposition Author(s): Anand, K., Hagelueken, G., Fusshoeller, D., Geyer, M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| German Research Foundation (DFG) | Germany | EXC2151-390873048 |
Revision History (Full details and data files)
- Version 1.0: 2022-01-12
Type: Initial release
