Download MendeleyCrystal structure of the computationally designed Scone-E protein co-crystallized with STA, form b
Mylemans, B., Vandebroek, L., Parac-Vogt, T.N., Voet, A.R.D.To be published.
7AX2
Crystal structure of the computationally designed Scone-E protein co-crystallized with STA, form b
- DOI: 10.2210/pdb7AX2/pdb
- Classification: DE NOVO PROTEIN
- Organism(s): synthetic construct
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2020-11-09 Released: 2021-01-13
- Funding Organization(s): Research Foundation - Flanders (FWO)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.206
- R-Value Work: 0.178
- R-Value Observed: 0.180
wwPDB Validation 3D Report Full Report
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Scone-E | A | 358 | synthetic construct | Mutation(s): 0 |  |
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SIW Query on SIW | A | Keggin (STA) O40 Si W12 LFGROBKNYNLKMF-UHFFFAOYSA-B |  | Ligand Interaction | |
| S5T Query on S5T | A | Monolacunary Keggin (STA) O39 Si W11 IXGGAOASOAZEII-UHFFFAOYSA-N |  | Ligand Interaction | |
| NA Query on NA | A | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.206
- R-Value Work: 0.178
- R-Value Observed: 0.180
- Space Group: I 41 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 133.517 | α = 90 |
| b = 133.517 | β = 90 |
| c = 70.093 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| DIALS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Deposited Date: 2020-11-09
- Released Date: 2021-01-13 Deposition Author(s): Mylemans, B., Vandebroek, L., Parac-Vogt, T.N., Voet, A.R.D.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Research Foundation - Flanders (FWO) | Belgium | GBM-D3229-ASP/17 |
| Research Foundation - Flanders (FWO) | Belgium | G0E4717N |
| Research Foundation - Flanders (FWO) | Belgium | G051917N |
| Research Foundation - Flanders (FWO) | Belgium | G0F9316N |
