7ANH | pdb_00007anh

DdhaC

PDB DOI: https://doi.org/10.2210/pdb7ANH/pdb

Classification: SUGAR BINDING PROTEIN
Organism(s): Campylobacter jejuni
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2020-10-11 Released: 2020-10-21
Deposition Author(s): Naismith, J.H., Woodward, L.
Funding Organization(s): Wellcome Trust

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.08 Å
R-Value Free:
0.232 (Depositor), 0.236 (DCC)
R-Value Work:
0.190 (Depositor), 0.198 (DCC)
R-Value Observed:
0.193 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history.

Literature

DdhaC

Naismith, J.H., Woodward, L.

To be published.

Macromolecule Content

Total Structure Weight: 40.52 kDa
Atom Count: 2,897
Modeled Residue Count: 347
Deposited Residue Count: 353
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
GDP-L-fucose synthase	A	353	Campylobacter jejuni	Mutation(s): 0 Gene Names: AY595_07840, B9Q63_05455, BB943_08725, D0W34_08630, D5I02_08530, DK813_08295, DQX79_06120, DW530_02880, F1P94_08750, FQZ47_07910... AY595_07840, B9Q63_05455, BB943_08725, D0W34_08630, D5I02_08530, DK813_08295, DQX79_06120, DW530_02880, F1P94_08750, FQZ47_07910, FRQ83_08390, FW031_08555, GAX04_08405, GRS20_08805, GSH24_04185, GY415_001379, GZD82_001462 EC: 1.1.1.271
UniProt
Find proteins for A0A5T1PRU5 (Campylobacter jejuni) Explore A0A5T1PRU5 Go to UniProtKB: A0A5T1PRU5
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A5T1PRU5
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.08 Å
R-Value Free: 0.232 (Depositor), 0.236 (DCC)
R-Value Work: 0.190 (Depositor), 0.198 (DCC)
R-Value Observed: 0.193 (Depositor)

Space Group: P 4₂ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 131.801	α = 90
b = 131.801	β = 90
c = 50.17	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
xia2	data reduction
xia2	data scaling
PHASER	phasing

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2020-10-21

Deposition Author(s):

Funding Organization	Location	Grant Number
Wellcome Trust	United Kingdom	100209/Z/12/Z)

Revision History (Full details and data files)

Version 1.0: 2020-10-21
Type: Initial release
Version 1.1: 2024-01-31
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.