Macromolecule Content

Total Structure Weight: 63.95 kDa
Atom Count: 4550
Residue Count: 568
Unique protein chains: 2

7AET

Pressure wave-exposed human hemoglobin: probe only data (3500 indexed images)

DOI: 10.2210/pdb7AET/pdb

Classification: OXYGEN TRANSPORT
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2020-09-18 Released: 2021-02-17
Deposition Author(s): Barends, T.R.M., Schlichting, I.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.53 Å
R-Value Free: 0.288
R-Value Work: 0.228

wwPDB Validation 3D Report Full Report

Literature

Effect of X-ray free-electron laser-induced shockwaves on haemoglobin microcrystals delivered in a liquid jet

Gruenbein, M.L., Schlichting, I.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Hemoglobin subunit alpha	AAA, CCC	139	Homo sapiens	Mutation(s): 0 Gene Names: HBA1, HBA2
Find proteins for P69905 (Homo sapiens) Explore P69905 Go to UniProtKB: P69905
NIH Common Fund Data Resources
PHAROS: P69905 GTEx: ENSG00000188536ENSG00000206172
Protein Feature View Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Hemoglobin subunit beta	BBB, DDD	145	Homo sapiens	Mutation(s): 0 Gene Names: HBB
Find proteins for P68871 (Homo sapiens) Explore P68871 Go to UniProtKB: P68871
NIH Common Fund Data Resources
PHAROS: P68871 GTEx: ENSG00000244734
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
HEM Query on HEM Download Ideal Coordinates CCD File SDF format, chain E [AAA] SDF format, chain G [BBB] SDF format, chain I [CCC] SDF format, chain K [DDD] MOL2 format, chain E [AAA] MOL2 format, chain G [BBB] MOL2 format, chain I [CCC] MOL2 format, chain K [DDD]	AAA, BBB, CCC, DDD	PROTOPORPHYRIN IX CONTAINING FE C₃₄ H₃₂ Fe N₄ O₄ KABFMIBPWCXCRK-RGGAHWMASA-L		Ligand Interaction
CMO Query on CMO Download Ideal Coordinates CCD File SDF format, chain F [AAA] SDF format, chain H [BBB] SDF format, chain J [CCC] SDF format, chain L [DDD] MOL2 format, chain F [AAA] MOL2 format, chain H [BBB] MOL2 format, chain J [CCC] MOL2 format, chain L [DDD]	AAA, BBB, CCC, DDD	CARBON MONOXIDE C O UGFAIRIUMAVXCW-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.53 Å
R-Value Free: 0.288
R-Value Work: 0.228
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.7	α = 90
b = 158.1	β = 90
c = 67.7	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
CrystFEL	data reduction
CrystFEL	data scaling
REFMAC	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2020-09-18
Released Date: 2021-02-17

Deposition Author(s):

Barends, T.R.M.

Schlichting, I.

Revision History

Version 1.0: 2021-02-17
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.