7AB4

Crystal structure of the Escherichia coli toxin-antitoxin system HipBST (HipT S59A)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.34 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.202 
  • R-Value Observed: 0.204 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of the Escherichia coli toxin-antitoxin system HipBST (HipT S59A)

Baerentsen, R.L.Brodersen, D.E.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Predicted transcriptional regulator, XRE familyA, D106Escherichia coli O127:H6 str. E2348/69Mutation(s): 0 
Gene Names: E2348C_3787
UniProt
Find proteins for B7UL98 (Escherichia coli O127:H6 (strain E2348/69 / EPEC))
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Go to UniProtKB:  B7UL98
Protein Feature View
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  • Reference Sequence
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Couple_hipA domain-containing proteinB, E102Escherichia coli O127:H6 str. E2348/69Mutation(s): 0 
Gene Names: E2348C_3786
UniProt
Find proteins for B7UL97 (Escherichia coli O127:H6 (strain E2348/69 / EPEC))
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Protein Feature View
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  • Reference Sequence
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
HipA_C domain-containing proteinC340Escherichia coli O127:H6 str. E2348/69Mutation(s): 1 
Gene Names: E2348C_3785
UniProt
Find proteins for B7UL96 (Escherichia coli O127:H6 (strain E2348/69 / EPEC))
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Protein Feature View
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  • Reference Sequence
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
HipA_C domain-containing proteinF340Escherichia coli O127:H6 str. E2348/69Mutation(s): 1 
Gene Names: E2348C_3785
UniProt
Find proteins for B7UL96 (Escherichia coli O127:H6 (strain E2348/69 / EPEC))
Explore B7UL96 
Go to UniProtKB:  B7UL96
Protein Feature View
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  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
FL-PEPTIDE LINKINGC3 H8 N O6 PSER
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.34 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.202 
  • R-Value Observed: 0.204 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 285.257α = 90
b = 107.146β = 90.71
c = 58.449γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing
PDB_EXTRACTdata extraction

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Novo Nordisk FoundationDenmarkNNF18OC0030646
Danish National Research FoundationDenmarkDNRF120

Revision History  (Full details and data files)

  • Version 1.0: 2022-01-12
    Type: Initial release