CFTR Associated Ligand (CAL) PDZ domain bound to peptidomimetic LyCALAc
Gill, N.P.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Golgi-associated PDZ and coiled-coil motif-containing protein | A, C [auth B] | 87 | Homo sapiens | Mutation(s): 0  Gene Names: GOPC, CAL, FIG | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9HD26 (Homo sapiens) Explore Q9HD26  Go to UniProtKB:  Q9HD26 | |||||
PHAROS:  Q9HD26 GTEx:  ENSG00000047932  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9HD26 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
LyCALAc | B [auth C], D | 10 | synthetic construct | Mutation(s): 0  | |
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | E [auth A], F [auth A], G [auth A], H [auth B], I [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
ALY Query on ALY | B [auth C], D | L-PEPTIDE LINKING | C8 H16 N2 O3 | LYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 36.568 | α = 90 |
b = 47.741 | β = 90 |
c = 97.448 | γ = 90 |
Software Name | Purpose |
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XDS | data reduction |
XSCALE | data scaling |
PHENIX | phasing |
PHENIX | model building |
PHENIX | refinement |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | R01-DK101541 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | P20-GM113132 |
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | P30-DK117469 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | T32-GM008704 |