6S6L

Cryo-EM structure of murine norovirus (MNV-1)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Dynamics in the murine norovirus capsid revealed by high-resolution cryo-EM.

Snowden, J.S.Hurdiss, D.L.Adeyemi, O.O.Ranson, N.A.Herod, M.R.Stonehouse, N.J.

(2020) PLoS Biol 18: e3000649-e3000649

  • DOI: https://doi.org/10.1371/journal.pbio.3000649
  • Primary Citation of Related Structures:  
    6S6L

  • PubMed Abstract: 

    Icosahedral viral capsids must undergo conformational rearrangements to coordinate essential processes during the viral life cycle. Capturing such conformational flexibility has been technically challenging yet could be key for developing rational therapeutic agents to combat infections. Noroviruses are nonenveloped, icosahedral viruses of global importance to human health. They are a common cause of acute gastroenteritis, yet no vaccines or specific antiviral agents are available. Here, we use genetics and cryo-electron microscopy (cryo-EM) to study the high-resolution solution structures of murine norovirus as a model for human viruses. By comparing our 3 structures (at 2.9- to 3.1-Å resolution), we show that whilst there is little change to the shell domain of the capsid, the radiating protruding domains are flexible, adopting distinct states both independently and synchronously. In doing so, the capsids sample a range of conformational space, with implications for maintaining virion stability and infectivity.


  • Organizational Affiliation

    Astbury Centre for Structural Molecular Biology, School of Molecular & Cellular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Capsid protein
A, B, C
541Murine norovirus 1Mutation(s): 0 
UniProt
Find proteins for Q2V8W4 (Norovirus (isolate Mouse/NoV/United States/MNV1/2002/GV))
Explore Q2V8W4 
Go to UniProtKB:  Q2V8W4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ2V8W4
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom102174/B/13/Z
Wellcome TrustUnited Kingdom102572/B/13/Z
Medical Research Council (United Kingdom)United KingdomMR/S007229/1

Revision History  (Full details and data files)

  • Version 1.0: 2020-05-13
    Type: Initial release