6NBK

Crystal structure of Arginase from Bacillus cereus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.161 
  • R-Value Observed: 0.163 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of Arginase from Bacillus cereus

Chang, C.Evdokimova, E.Mcchesney, M.Joachimiak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
ArginaseA, B, C, D, E, F297Bacillus thuringiensis DB27Mutation(s): 0 
Gene Names: BTDB27_005763
EC: 3.5.3.1
UniProt
Find proteins for W8YSI5 (Bacillus thuringiensis DB27)
Explore W8YSI5 
Go to UniProtKB:  W8YSI5
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download Ideal Coordinates CCD File 
G [auth A] , H [auth A] , I [auth A] , K [auth B] , L [auth B] , M [auth B] , O [auth C] , P [auth C] , 
G [auth A],  H [auth A],  I [auth A],  K [auth B],  L [auth B],  M [auth B],  O [auth C],  P [auth C],  R [auth D],  S [auth D],  T [auth E],  U [auth E],  V [auth F],  W [auth F]
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

Download Ideal Coordinates CCD File 
J [auth A], N [auth B], Q [auth C]CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 148.022α = 90
b = 153.803β = 90
c = 83.137γ = 90
Software Package:
Software NamePurpose
SCALEPACKdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
HKL-3000data reduction
HKL-3000phasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2018-12-19
    Type: Initial release
  • Version 1.1: 2019-05-15
    Changes: Data collection, Experimental preparation