6PO4

2.1 Angstrom Resolution Crystal Structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (mtnN) from Haemophilus influenzae PittII.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.160 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

2.1 Angstrom Resolution Crystal Structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (mtnN) from Haemophilus influenzae PittII.

Minasov, G.Shuvalova, L.Cardona-Correa, A.Dubrovska, I.Grimshaw, S.Kwon, K.Satchell, K.J.F.Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
A, B, C, D, E, F
234Haemophilus influenzae PittIIMutation(s): 0 
Gene Names: mtnN
EC: 3.2.2.9
Find proteins for A0A0E1SMD9 (Haemophilus influenzae PittII)
Go to UniProtKB:  A0A0E1SMD9
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
HCS
Query on HCS

Download SDF File 
Download CCD File 
A, B, C, E, F
2-AMINO-4-MERCAPTO-BUTYRIC ACID
C4 H9 N O2 S
FFFHZYDWPBMWHY-VKHMYHEASA-N
 Ligand Interaction
BO3
Query on BO3

Download SDF File 
Download CCD File 
A, B, C, D, E, F
BORIC ACID
B H3 O3
KGBXLFKZBHKPEV-UHFFFAOYSA-N
 Ligand Interaction
ADE
Query on ADE

Download SDF File 
Download CCD File 
A, B, C, D, E, F
ADENINE
C5 H5 N5
GFFGJBXGBJISGV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.160 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 124.536α = 90.00
b = 214.743β = 90.00
c = 146.904γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data reduction
MoRDaphasing
PDB_EXTRACTdata extraction
REFMACrefinement
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-07-17
    Type: Initial release