Download MendeleyCRYSTAL STRUCTURE OF ENOLASE FROM LEGIONELLA PNEUMOPHILA BOUND TO 2-PHOSPHOGLYCERIC ACID AND MAGNESIUM
Davies, D.R., Abendroth, J., Lorimer, D.D., Edwards, T.E.To be published.
6NB2
CRYSTAL STRUCTURE OF ENOLASE FROM LEGIONELLA PNEUMOPHILA BOUND TO 2-PHOSPHOGLYCERIC ACID AND MAGNESIUM
- PDB DOI: https://doi.org/10.2210/pdb6NB2/pdb
- Classification: LYASE
- Organism(s): Legionella pneumophila subsp. pneumophila str. Philadelphia 1
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2018-12-06 Released: 2019-01-23
- Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.172
- R-Value Work: 0.146
- R-Value Observed: 0.147
wwPDB Validation 3D Report Full Report
Currently 6NB2 does not have a validation slider image.
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Enolase | 430 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | Mutation(s): 0 Gene Names: eno, lpg2037 EC: 4.2.1.11 |  | |
UniProt | |||||
Find proteins for Q5ZTX1 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZTX1 Go to UniProtKB: Q5ZTX1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5ZTX1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 2PG Query on 2PG | C [auth A], K [auth B] | 2-PHOSPHOGLYCERIC ACID C3 H7 O7 P GXIURPTVHJPJLF-UWTATZPHSA-N |  | ||
| EDO Query on EDO | F [auth A] G [auth A] H [auth A] I [auth A] J [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| MG Query on MG | D [auth A], E [auth A], L [auth B], M [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.85 Å
- R-Value Free: 0.172
- R-Value Work: 0.146
- R-Value Observed: 0.147
- Space Group: P 42 21 2
- Diffraction Data: https://doi.org/10.18430/m36nb2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 116.45 | α = 90 |
| b = 116.45 | β = 90 |
| c = 142.78 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XSCALE | data scaling |
| XDS | data reduction |
| PHASER | phasing |
Structure Validation
Currently 6NB2 does not have a validation slider image.
Entry History & Funding Information
Deposition Data
- Released Date: 2019-01-23 Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | HHSN272201700059C |
Revision History (Full details and data files)
- Version 1.0: 2019-01-23
Type: Initial release - Version 1.1: 2019-12-18
Changes: Author supporting evidence - Version 1.2: 2023-10-11
Changes: Data collection, Database references, Derived calculations, Refinement description
